Crystal Lagoon Malta: 2025 Travel Guide for First-Time Visitors
Crystal Lagoon is one of the most beautiful lagoons on Comino Island. If you want crystal-clear waters and hidden sea caves, visit Crystal Lagoon Malta. It’s the perfect escape from the crowds. Crystal Lagoon Malta is a hidden gem of Comino. It offers a more peaceful, adventurous alternative to the famous Blue Lagoon. It’s an ideal spot for snorkelling, cliff-jumping, free diving, and exploring sea caves.

The lagoon is only accessible by boat. To enjoy Crystal Lagoon, book a private boat tour with Gozoblu. It’s the best way to experience the lagoon’s beauty.
If it’s your first time visiting the Crystal Lagoon in Malta, this 2025 travel guide is for you. This travel guide will cover:
- What is Crystal Lagoon?
- How to Get to Crystal Lagoon
- Best Things to Do at Crystal Lagoon
- Must-Visit Spots in Crystal Lagoon
- Recommended Exploration Points Near Crystal Lagoon
- Essentials For Your Crystal Lagoon Trip
- Reasons to Visit Crystal Lagoon Malta
- Why Choose GOZOblu Private Boat Tours
- What Visitors Are Saying
- Frequently Asked Questions (FAQs)
What is Crystal Lagoon?
If you’re planning your first trip to Malta, Crystal Lagoon Malta should be at the top of your list. It’s a hidden paradise of crystal-clear waters, towering cliffs, and sea caves. Comino Malta is famous for its stunning landscapes. Many tourists visit the Blue Lagoon, but Crystal Lagoon offers a quieter and just as stunning experience.
Crystal Lagoon is perfect for travellers seeking serene relaxation or thrilling water adventures. This secluded spot has it all. Swim in clear waters, snorkel with vibrant marine life, or jump cliffs.
What makes Crystal Lagoon special?
- Tranquillity: Fewer tourists, giving you more space to unwind and enjoy nature.
- Crystal-clear waters: Perfect visibility for snorkelling and diving.
- Dramatic cliffs: A paradise for cliff jumpers and adventurers.
- Hidden caves: Best explored by kayak, small boat, or a private boat tour in Malta.
The best way to reach Crystal Lagoon Malta is by boat, as no roads are going to this secluded spot. You can join a Comino boat trip that includes stops at both the Blue Lagoon and Crystal Lagoon. You can rent a boat so you can explore at your own pace. You can opt for a private boat tour that provides a more exclusive experience.

Contact Gozoblu Private Boat Tours for a luxurious adventure in Crystal Lagoon.
For a mix of relaxation and adventure, visit Crystal Lagoon Malta. It’s a must-destination for first-time visitors. It promises an authentic taste of Malta’s natural beauty.
How to Get to Crystal Lagoon
Reaching this stunning spot isn’t difficult, but it does need a bit of planning. Since there are no roads leading to the lagoon, the best way to get there is by boat.
Private Malta Boat Tours in Gozo and Comino
First-time visitors should book a private boat tour in Malta. It’s one of the best ways to explore Comino’s hidden gems. Private boat tours visit the Blue Lagoon, Crystal Lagoon, and hidden spots in the Mediterranean.

Gozoblu Private Boat Tours offers custom trips to discover iconic spots at your own pace. A private boat offers more freedom than shared tours. You can swim, snorkel, or sightsee whenever you like. Plus, you can avoid peak crowds and enjoy Comino’s beauty in a more peaceful setting.
Gozoblu provides flexible tour options to suit different travel styles.
- 2-Hour Private Boat Tour: Ideal for a short visit. You can visit the Blue Lagoon and Crystal Lagoon in Malta. It also includes visits to Comino Caves, Saint Mary’s Tower, Santa Marija Bay, and Cominotto.
- Half-Day Tour: Offers the same locations as the 2-hour private boat tours, but you have more time to explore. You can enjoy the beauty of Malta without feeling rushed.
- Full-Day Tour: The ultimate experience. It lets you fully immerse yourself in Comino’s waters and snorkel in the Crystal Lagoon. You can also visit the Blue Grotto upon request.
Other Boat Tour Options
If a private tour isn’t what you’re looking for, there are other ways to reach Crystal Lagoon Malta:

Shared Boat Tours: A budget-friendly and social option. They follow fixed schedules and can become crowded.

Luxury Yacht Charters: For a VIP experience, book a luxury yacht. It includes gourmet dining and premium service.
No matter which option you choose, a Comino Malta boat trip is unforgettable. It is one of the most stunning destinations in the Mediterranean!
2. Boat Rental Malta
Are you an independent traveller looking to explore at your own pace? Renting a boat is one of the best ways to experience Crystal Lagoon Malta.
You can hire small boats from Gozo or Malta. You don’t need a boating licence for vessels under a certain size. It’s a more convenient option even for beginners. Most boat rental Malta providers give basic instructions on handling the boat.
Benefits of boat rental in Malta
- Freedom & Flexibility – Plan your itinerary and stop where you like. You can spend as much time as you want at Crystal Lagoon Malta. You can visit the Blue Lagoon or the stunning sea caves along Comino’s coastline.
- Avoid the Crowds – Group tours follow set schedules. Renting a boat lets you visit the most scenic spots before the peak hour rush.
- Ideal for Groups & Families – If you’re travelling with friends or family, hiring a boat can be a cost-effective and private way to explore Comino.
Pro Tip: Rent a boat in the early morning or late afternoon. It will be a more peaceful way to experience Crystal Lagoon Malta. Private boat tours in Malta are often more comfortable and guided. They are best if you prefer a captain to navigate while you relax and enjoy the views.
3. Kayak Adventures
For adventurous travellers, kayaking is a great way to see Crystal Lagoon’s beauty. Paddle through the stunning coastline of Comino. You’ll see hidden caves, dramatic sea arches, and secluded inlets that larger boats can’t reach.

If you enjoy outdoor activities and want an active way to explore, this is one of the best options to experience Comino Malta by boat, but with the added challenge of a workout.
Getting there by kayak:
- Rent a kayak from Gozo or Malta for a half-day or full-day adventure. Several rental operators offer both single and double kayaks.
- Expect a 1.5 to 2-hour paddle (depending on sea conditions and your fitness level).
- Pack wisely. Bring plenty of water, a waterproof bag for valuables, and reef-safe sunscreen.
Why choose kayaking going to Crystal Lagoon?
- Explore Comino’s hidden sea caves, such as the Long Tunnel Cave and Popeye’s Cave, which larger boats often miss.
- Kayaking is a sustainable way to explore, leaving no pollution behind.
- See Crystal Lagoon Malta from a low vantage point. It makes the towering limestone cliffs and crystal-clear waters even more impressive.
If you’re a first-time visitor to Malta, try a kayak trip to Crystal Lagoon. It’s an unforgettable mix of adventure, peace, and exploration.
Best Things to Do at Crystal Lagoon
Crystal Lagoon has something for everyone. It offers an unforgettable mix of adventure, relaxation, and stunning natural beauty. There are a lot of things you can do at Crystal Lagoon Malta.
1. Swimming in Crystal-Clear Waters

The calm, crystal-clear waters of Crystal Lagoon Malta make it an ideal swimming spot. The lagoon offers a serene and refreshing experience.
- Enjoy refreshing, turquoise waters that are perfect for a relaxing dip.
- Swim near stunning limestone cliffs and scenic caves.
- Experience one of the best natural swimming spots in Malta.
Tip: Visit early in the morning. Book a private boat tour with Gozoblu to enjoy a peaceful swim without the crowds.
2. Snorkelling and Diving

The lagoon’s clear water makes it perfect for snorkelling and diving. The crystal-clear water makes it a snorkeller’s paradise. Expect to see:
- Colourful fish darting between rocks.
- Underwater caves and tunnels.
- Stunning rock formations are perfect for underwater photography.
Tip: Bring your snorkelling gear to save on rental costs and enjoy the best experience. If you opt for private boat tours, Gozoblu provides snorkelling gear.
3. Freediving Adventure

For more experienced water lovers, Crystal Lagoon Malta is a top freediving spot. The deep waters and sea caves offer exciting exploration opportunities.
- Test your breath-holding skills in stunning underwater landscapes.
- Dive through hidden tunnels and deep rock formations.
- Experience the thrill of Malta’s top freediving destination.
- Discover the P31 Wreck, a sunken patrol boat near Crystal Lagoon, which has become a popular site for freediving and scuba diving. (You can see the P31 in the background on the photo above)
Safety Tip: Always freedive with a buddy and check water conditions beforehand.
4. Hiking to Comino Tower

Take a break from the water and go on a scenic hike to Santa Marija Tower (also known as Comino Tower). This 17th-century watchtower sits atop a hill, offering:
- Breathtaking panoramic views of Comino and the Mediterranean.
- A glimpse into Malta’s rich maritime history.
- A great photography spot for stunning landscape shots.
Tip: Wear comfortable shoes and bring plenty of water, especially during the summer months.
5. Exploring Sea Caves

Hidden along the lagoon’s coastline are incredible caves waiting for you. Some of the most famous and must-visit spots include:
- Popeye Cave – Featured in the Popeye movie from the 1980s.
- Lover’s Cave – A romantic, secluded cave with stunning reflections inside.
- Pirate’s Cave – Once rumoured to be a hiding place for smugglers in ancient times.
Tip: Book the best Malta boat tours for a personalised cave exploration experience.
6. Cliff Jumping for Thrill Seekers

If you’re up for an adrenaline rush, Crystal Lagoon Malta offers some of the best cliff-jumping spots in Malta. The cliffs here vary in height, so there’s something for both beginners and daredevils.
- Test your courage with different jump heights.
- Experience one of Malta’s most thrilling water activities.
- Feel the rush of jumping into deep, clear waters.
Safety Tips: Always check water depth before jumping. Avoid jumping headfirst. Avoid jumping alone, have a friend nearby for safety.
7. Relax and Soak in the Views

If adventure isn’t your thing, simply relax and enjoy the surroundings. Crystal Lagoon Malta is also a perfect spot for relaxation and scenic enjoyment. Crystal Lagoon is one of the best places to:
- Sunbathe on smooth rocky ledges.
- Enjoy a peaceful picnic with stunning sea views.
- Capture Instagram-worthy photos of the vibrant blue waters.
Tip: Arrive early or book Malta private boat tours with Gozoblu to enjoy the serenity before crowds arrive.
Must-Visit Spots in Crystal Lagoon
1. The Epic Small Sea Cave

A hidden gem perfect for exploration, offering a sense of adventure and discovery. This tiny yet enchanting sea cave offers a sense of mystery and discovery. Accessible by kayak or a private boat tour in Malta, it’s a hidden gem on Comino Island. The cave’s narrow entrance leads to a larger chamber. This is a must-visit for those seeking adventure and a peaceful moment away from the crowds.
2. Long Tunnel Cave

A fascinating natural formation is ideal for snorkelling and diving enthusiasts. Long Tunnel Cave is a natural formation that stretches deep into the cliffs of Comino. The cave’s tunnel is long enough to swim through. You’ll be amazed by the kaleidoscope of colours that dance on the walls from the sunlight outside. It’s one of the best spots for exploring marine life and underwater photography.
3. Popeye's Cave

Popeye’s Cave, also known to locals as L-Għar ta’ Bla Saqaf (“the Roofless Cave”) and Taħt il-Ħnejja (“Under the Wreath”), is a remarkable natural wonder formed over centuries by the relentless force of the sea. The constant pounding of waves against the limestone cliffs has sculpted this breathtaking cave, serving as a striking example of the powerful geological processes that have shaped the Maltese archipelago.
Named after the 1980s Popeye movie filmed nearby. This cave is a picturesque spot with cultural significance. It has become a popular attraction for film enthusiasts. The cave’s large entrance and its proximity to Blue Lagoon make it easy to spot while cruising around the island. For those interested in the island’s cinematic history, Popeye’s Cave is a must-visit. It offers both cultural significance and natural beauty.
This natural archway, tucked away along the lagoon’s limestone cliffs, offers a stunning passage through the rock. It creates a perfect photo op for travellers. It is best explored by kayak or private boat tour to Malta. This spot is ideal for those who love adventure.
4. Lover’s Cave

A small, intimate cave. It is known for its mesmerising blue hues when the sunlight hits the water just right. If you venture all the way inside, you’ll discover a patch of soft white sand, making it a truly secluded and romantic escape.
Adding to its allure, this cave was featured in the 2002 film The Count of Monte Cristo, further cementing its place as a must-visit location for movie enthusiasts and adventurers alike.
A Comino Malta boat tour or a kayak trip will take you to this cave.
5. Crystal Lagoon Diving Site

This site is perfect for scuba divers. It has underwater caves, rock formations, and abundant marine life. First-time visitors who enjoy snorkelling or free diving will love the Crystal Lagoon Malta diving area. It offers a thrilling experience.
Crystal Lagoon in Malta is a premier destination for both snorkelling and scuba diving enthusiasts. The diving site features a 30-metre-long tunnel that starts at a depth of 5 metres and descends to 8 metres. The Lagoon’s maximum depth reaches 16 metres, making it suitable for divers of various experience levels. For first-time visitors, it’s important to note that the Crystal Lagoon is a popular dive site, especially during the summer months. The area can become crowded with boat traffic, so divers should exercise caution and be aware of their surroundings.
6. Hidden Blue Hole
Located near the entrance to Crystal Lagoon, this submerged sea cave is a paradise for divers. The clear, deep blue waters here are perfect for underwater exploration.
7. The Sunken Shipwreck P31 Site

A private boat tour in Malta can take you to nearby diving sites, just outside Crystal Lagoon. You’ll find sunken shipwrecks there, perfect for history lovers and experienced divers.
Recommended Exploration Points Near Crystal Lagoon
After Crystal Lagoon, explore nearby gems. It’ll make your trip to Comino even better.
- Santa Marija Bay is a tranquil bay offering serene waters and a peaceful atmosphere.
- San Niklaw Bay is another secluded spot perfect for relaxation and swimming.
- Blue Lagoon, famous for its bright blue waters, is worth a visit despite the crowds.
- Cominotto, a small islet near Comino, offers secluded spots for swimming and sunbathing.
- Santa Maria Pirate Caves is an intriguing cave rumoured to have been a hideout for pirates, where they also hid their treasures.
- Elephant’s Head Rock is a unique rock formation that looks like an elephant’s head. It’s popular among divers.
- Santa Marija Chapel is a quaint chapel offering a glimpse into the island’s history.
- Santa Marija Tower, a 17th-century watchtower, provides panoramic views of the island.
- Santa Marija Battery, a historic coastal battery is worth exploring for history enthusiasts.
- Comino Island Hiking Trails offers scenic hiking trails with stunning views.
Essentials For Your Crystal Lagoon Trip
Before going to Crystal Lagoon, some prep can ensure an amazing time.
Best Time to Visit Crystal Lagoon Malta
- Spring and Autumn: Perfect weather with fewer crowds.
- Summer: Ideal for swimming, but expect more visitors.
- Early Morning or Late Afternoon: Avoid peak hours for a more peaceful visit.
What to Pack
- Swimsuit and towel.
- Snorkelling gear (to save on rental costs).
- Reef-safe sunscreen (to protect marine life).
- Plenty of water and snacks.
- Waterproof bag for valuables.
Budgeting for Your Trip
- Boat tours: €25-€50 per person (shared)
- Private boat tour Malta: Starting from €199
- Kayak rentals: Around €20-€30 per hour
Tips for Visiting Crystal Lagoon
- Arrive Early: To enjoy the lagoon with fewer people, plan to arrive early in the day.
- Bring Essentials: Pack snorkelling gear, sunscreen, water, and snacks, as amenities are limited.
- Respect the Environment: Ensure you leave no trace by taking all rubbish with you. Avoid disturbing marine life.
Safety and Environmental Awareness
Crystal Lagoon Malta is a fragile ecosystem. It’s our responsibility to keep it beautiful for future generations.
Safety Tips:
- Be mindful of changing tides and currents.
- Wear a life jacket when kayaking or boating.
- Respect local guidelines and signage.
Eco-friendly Practices:
- Avoid leaving any litter behind.
- Use eco-friendly sunscreen to protect marine life.
- Refrain from touching coral or disturbing wildlife.
Reasons to Visit Crystal Lagoon Malta
- Tranquillity: Experience a peaceful environment away from the more crowded tourist spots.
- Natural Beauty: Marvel at the stunning turquoise waters and impressive limestone cliffs.
- Adventure Opportunities: Engage in activities like snorkelling, diving, and cliff-jumping.
Why Choose GOZOblu Private Boat Tours
Exploring Crystal Lagoon Malta is amazing. Choosing the right boat tour matters a lot. GOZOblu offers a premium way to discover the beauty of Malta, far from the crowded tour boats. With experienced guides and customizable itineraries, GOZOblu ensures a memorable and tailored experience.
- Exclusive and Personalised Experience. Unlike large group tours with fixed schedules, GOZOblu offers complete flexibility. You can spend extra time snorkelling in Crystal Lagoon or explore hidden caves. You can stop at quiet coves that larger boats can’t access. It’s the perfect option for couples, families, and small groups who want to experience Malta’s beauty at their own pace.
- Experienced Skippers. GOZOblu’s captains are not just boat drivers. They have expert knowledge of the Maltese coastline. They know the best snorkelling spots, secret caves, and historical sites around Comino Malta. You will discover hidden gems that most tourists miss.
- Access to Unique Locations. With GOZOblu’s private boat tours, you won’t just visit the typical tourist spots. Your captain can also take you to exclusive locations such as Elephant’s Head Rock, Blue Grotto, Santa Marija Caves, and other locations that larger boats can’t access.
- Comfortable and Well-Equipped Boats. GOZOblu takes pride in our high-quality, well-maintained boats. They ensure a comfortable and safe journey. Our 24-foot RIB boat has a Yamaha 250 V6 engine. It combines luxury and performance for a fast, smooth ride along Malta’s stunning coastline.
- Sunset and Custom Tours Available. For a truly magical experience, GOZOblu offers sunset boat tours. You can watch the sun dip below the horizon while floating in the serene waters of Comino. For special occasions like a honeymoon, GOZOblu can customise your itinerary to make the trip more memorable.
- Convenient Departure Points. GOZOblu operates from Cirkewwa (Malta) and Mgarr (Gozo). It’s easy to start your adventure whether you’re staying in Malta or Gozo. These strategic departure locations mean you’ll reach the most beautiful spots quickly. You have more time to explore.
Book Your GOZOblu Private Boat Tour Today!
For the best Malta boat tours, try GOZOblu’s private tour. It is the perfect way to explore Crystal Lagoon, Comino, and beyond. GOZOblu offers a unique, unforgettable experience. You can choose a peaceful escape, an adventurous snorkelling trip, or a romantic sunset cruise.
What Visitors Are Saying
Still not sure if Crystal Lagoon is worth a visit? Here’s what travellers have to say:
“Amazing visit. Can access it from the shore. Great snorkelling, swimming, cliff jumping, etc.” – Lewis Collings
“We saw so many fish to see while snorkelling! Such a relaxing yet invigorating experience. I can’t wait to return.” – Avisha Spears.
“The best popular beach and beautiful colour crystal clear water” – Ferenc Léránt
Frequently Asked Questions (FAQs)
Is Crystal Lagoon suitable for families?
Yes, but keep in mind that there are no facilities, so come prepared.
Can I swim between Crystal Lagoon and Blue Lagoon?
It’s possible, but it’s a long swim. Alternatively, you can take a walk between Crystal Lagoon and Blue Lagoon. You can also rent a boat or if you want a luxury experience, opt for a private boat tour Malta.
Are there lifeguards at Crystal Lagoon?
No, it’s an unmonitored area, so swim at your own risk.
How do I get to Crystal Lagoon Malta?
The best way to reach Crystal Lagoon Malta is by boat from Malta or Gozo. You can book a Comino Malta boat tour, a private boat tour Malta, or even rent a boat to explore at your own pace. Some travellers also kayak to Crystal Lagoon from nearby locations.You can also walk from Blue Lagoon but you won’t experience the full Crystal Lagoon as the caves are not accessible by walk.
Is Crystal Lagoon crowded?
Crystal Lagoon is less crowded than Blue Lagoon. But during peak summer months, it can still attract visitors. For a quieter experience, visit in the morning. You can also opt for a private Malta boat trip to enjoy the lagoon away from big tour groups.
Is Crystal Lagoon safe for children?
Yes, but keep in mind: that Crystal Lagoon Malta does not have shallow beach areas. There are no lifeguards, so adult supervision is essential. Life jackets are highly recommended for young swimmers.
How long should I plan to stay at Crystal Lagoon?
Most visitors stay for 2-4 hours, enjoying swimming, snorkelling, and cave exploration. If you’re on a private boat tour in Malta, you may have the chance to spend more time and explore other nearby spots.
Can I visit both Crystal Lagoon and Blue Lagoon in one day?
Absolutely! Many Comino Malta boat tours include stops at both locations. However, if you prefer a more relaxed, exclusive experience, opt for a private boat tour of Malta to avoid crowds and explore at your own pace. You can also opt for a 2 hour GOZOblu Private boat tour where we can explore all of Comino’s highlights in 2 hours.
Why Crystal Lagoon Should Be on Your Malta Itinerary
The Blue Lagoon is more than just a beautiful destination, it’s an experience that captures the heart and soul of Malta. Whether you’re embarking on an adventure-filled day exploring crystal-clear waters or simply relaxing under the Mediterranean sun, this spot offers something for everyone.
From budget-friendly ferry rides to luxury private boat tours in Malta, the Blue Lagoon caters to all travellers. Picture yourself snorkelling in the shimmering blue waters, hiking along Comino’s rugged trails, or enjoying a cocktail on a luxury Blue Lagoon Malta boat trip. It truly is the perfect mix of adventure and relaxation.
So, what are you waiting for? Whether you’re travelling solo, with family, or celebrating a special occasion, the Blue Lagoon Malta boat trips promises an unforgettable experience that will leave you longing to return.
Plan your Blue Lagoon Malta boat trip today and immerse yourself in the breathtaking beauty of this Maltese paradise!
If you’re planning to visit the Blue Lagoon, read this blog first “Blue Lagoon Malta Boat Trip: The Ultimate 2025 Guide“